Carnation DB

Dca33249.1

Annotation

5-exons
f-1
sp|A5B3I2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004365#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold3394)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33249.1	1	365	549	44.44	365	67	3e-154
Target_name	Start	End	Length	Cov(%)
sp\|A5B3I2_VITVI	869	1233	1265	28.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33249.1	1	365	549	31.87	365	48	4e-102
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	976	1339	1401	25.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3394	Augus-PASA	mRNA	20422	28891	.	-	.	ID=Dca33249.1;Parent=Dca33249
scaffold3394	Augus-PASA	exon	20422	20663	.	-	.	ID=Dca33249.1.exon1;Parent=Dca33249.1
scaffold3394	Augus-PASA	exon	21020	21109	.	-	.	ID=Dca33249.1.exon2;Parent=Dca33249.1
scaffold3394	Augus-PASA	exon	21194	21289	.	-	.	ID=Dca33249.1.exon3;Parent=Dca33249.1
scaffold3394	Augus-PASA	exon	22751	22876	.	-	.	ID=Dca33249.1.exon4;Parent=Dca33249.1
scaffold3394	Augustus	exon	27796	28891	.	-	.	ID=Dca33249.1.exon5;Parent=Dca33249.1