Dca33264.1
Annotation
- 2-exons
- f-2
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold33961)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33264.1 |
1 |
270 |
322 |
46.89 |
270 |
56 |
3e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
1245 |
1510 |
1788 |
14.87 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33264.1 |
136 |
191 |
322 |
10.86 |
56 |
63 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
35 |
90 |
119 |
47.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold33961 |
Augustus |
mRNA |
241 |
5292 |
. |
+ |
. |
ID=Dca33264.1;Parent=Dca33264 |
| scaffold33961 |
Augustus |
exon |
241 |
1051 |
. |
+ |
. |
ID=Dca33264.1.exon1;Parent=Dca33264.1 |
| scaffold33961 |
Augustus |
exon |
5134 |
5292 |
. |
+ |
. |
ID=Dca33264.1.exon2;Parent=Dca33264.1 |
