Carnation DB

Dca33289.1

Annotation

12-exons
f-1
sp|D7SIL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05150#unknown#0F0P0C
sp|B9RLL7_RICCO#Kelch repeat protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1469310#unknown#0F0P0C
Repeat List (scaffold34)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33289.1	194	333	520	9.23	140	34	1e-12
Target_name	Start	End	Length	Cov(%)
sp\|D7SIL1_VITVI	24	160	605	22.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33289.1	194	333	520	9.23	140	34	2e-13
Target_name	Start	End	Length	Cov(%)
AT1G18610.1	22	158	556	24.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold34	Augustus	mRNA	41210	50966	.	+	.	ID=Dca33289.1;Parent=Dca33289
scaffold34	Augustus	exon	41210	41341	.	+	.	ID=Dca33289.1.exon1;Parent=Dca33289.1
scaffold34	Augustus	exon	41530	41643	.	+	.	ID=Dca33289.1.exon2;Parent=Dca33289.1
scaffold34	Augustus	exon	42467	42571	.	+	.	ID=Dca33289.1.exon3;Parent=Dca33289.1
scaffold34	Augustus	exon	42666	42707	.	+	.	ID=Dca33289.1.exon4;Parent=Dca33289.1
scaffold34	Augustus	exon	42786	42930	.	+	.	ID=Dca33289.1.exon5;Parent=Dca33289.1
scaffold34	Augustus	exon	47210	47362	.	+	.	ID=Dca33289.1.exon6;Parent=Dca33289.1
scaffold34	Augustus	exon	47851	48003	.	+	.	ID=Dca33289.1.exon7;Parent=Dca33289.1
scaffold34	Augustus	exon	48443	48607	.	+	.	ID=Dca33289.1.exon8;Parent=Dca33289.1
scaffold34	Augustus	exon	48713	48968	.	+	.	ID=Dca33289.1.exon9;Parent=Dca33289.1
scaffold34	Augustus	exon	49798	49942	.	+	.	ID=Dca33289.1.exon10;Parent=Dca33289.1
scaffold34	Augustus	exon	50469	50589	.	+	.	ID=Dca33289.1.exon11;Parent=Dca33289.1
scaffold34	Augustus	exon	50935	50966	.	+	.	ID=Dca33289.1.exon12;Parent=Dca33289.1