Carnation DB

Dca33304.1

Annotation

9-exons
f-1
sp|B9GFL2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_550198#GO:0005694;GO:0005524;GO:0003824;GO:0003677#3F0P1C
Os03t0752200-01 Similar to AtSPO11-1.
Repeat List (scaffold34)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33304.1	1	184	187	70.05	184	56	5e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9GFL2_POPTR	87	323	365	64.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33304.1	13	182	187	62.03	170	53	1e-56
Target_name	Start	End	Length	Cov(%)
Os03t0752200-01	124	344	382	57.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold34	Augustus	mRNA	181939	186504	.	+	.	ID=Dca33304.1;Parent=Dca33304
scaffold34	Augustus	exon	181939	181993	.	+	.	ID=Dca33304.1.exon1;Parent=Dca33304.1
scaffold34	Augustus	exon	182942	183015	.	+	.	ID=Dca33304.1.exon2;Parent=Dca33304.1
scaffold34	Augustus	exon	184090	184114	.	+	.	ID=Dca33304.1.exon3;Parent=Dca33304.1
scaffold34	Augustus	exon	184629	184687	.	+	.	ID=Dca33304.1.exon4;Parent=Dca33304.1
scaffold34	Augustus	exon	184760	184791	.	+	.	ID=Dca33304.1.exon5;Parent=Dca33304.1
scaffold34	Augustus	exon	184909	185014	.	+	.	ID=Dca33304.1.exon6;Parent=Dca33304.1
scaffold34	Augustus	exon	185324	185444	.	+	.	ID=Dca33304.1.exon7;Parent=Dca33304.1
scaffold34	Augustus	exon	185596	185656	.	+	.	ID=Dca33304.1.exon8;Parent=Dca33304.1
scaffold34	Augustus	exon	186474	186504	.	+	.	ID=Dca33304.1.exon9;Parent=Dca33304.1