Carnation DB

Dca33344.1

Annotation

5-exons
f-1
sp|A5BVY1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_044222#GO:0003676;GO:0015074#1F1P0C
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold340)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33344.1	9	581	585	52.47	573	44	6e-151
Target_name	Start	End	Length	Cov(%)
sp\|A5BVY1_VITVI	394	1092	1100	63.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33344.1	15	80	585	4.61	66	41	2e-07
Target_name	Start	End	Length	Cov(%)
Os08t0125300-01	631	696	1428	4.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold340	Augustus	mRNA	120923	126988	.	+	.	ID=Dca33344.1;Parent=Dca33344
scaffold340	Augustus	exon	120923	121162	.	+	.	ID=Dca33344.1.exon1;Parent=Dca33344.1
scaffold340	Augustus	exon	121343	121655	.	+	.	ID=Dca33344.1.exon2;Parent=Dca33344.1
scaffold340	Augustus	exon	125540	125897	.	+	.	ID=Dca33344.1.exon3;Parent=Dca33344.1
scaffold340	Augustus	exon	126037	126453	.	+	.	ID=Dca33344.1.exon4;Parent=Dca33344.1
scaffold340	Augustus	exon	126559	126988	.	+	.	ID=Dca33344.1.exon5;Parent=Dca33344.1