Carnation DB

Dca33377.1

Annotation

6-exons
f-1
sp|B9RMY4_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1341450#GO:0016020#0F0P1C
Repeat List (scaffold3405)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33377.1	2	326	347	48.12	325	51	5e-96
Target_name	Start	End	Length	Cov(%)
sp\|B9RMY4_RICCO	60	386	402	81.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33377.1	1	342	347	44.95	342	46	9e-89
Target_name	Start	End	Length	Cov(%)
AT3G30340.1	22	364	364	94.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3405	Augustus	mRNA	17756	19601	.	+	.	ID=Dca33377.1;Parent=Dca33377
scaffold3405	Augustus	exon	17756	17880	.	+	.	ID=Dca33377.1.exon1;Parent=Dca33377.1
scaffold3405	Augustus	exon	17973	18035	.	+	.	ID=Dca33377.1.exon2;Parent=Dca33377.1
scaffold3405	Augustus	exon	18120	18236	.	+	.	ID=Dca33377.1.exon3;Parent=Dca33377.1
scaffold3405	Augustus	exon	18317	18716	.	+	.	ID=Dca33377.1.exon4;Parent=Dca33377.1
scaffold3405	Augustus	exon	19167	19318	.	+	.	ID=Dca33377.1.exon5;Parent=Dca33377.1
scaffold3405	Augustus	exon	19415	19601	.	+	.	ID=Dca33377.1.exon6;Parent=Dca33377.1