Dca33449.1
Annotation
- 3-exons
- f-1
- sp|B9RLB8_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1464810#GO:0016874#1F0P0C
- Repeat List (scaffold3414)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33449.1 |
7 |
420 |
433 |
64.2 |
414 |
68 |
4e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RLB8_RICCO |
7 |
419 |
421 |
98.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33449.1 |
4 |
420 |
433 |
52.65 |
417 |
55 |
9e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G13570.1 |
2 |
414 |
416 |
99.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3414 |
Augustus |
mRNA |
35235 |
36729 |
. |
- |
. |
ID=Dca33449.1;Parent=Dca33449 |
| scaffold3414 |
Augustus |
exon |
35235 |
35561 |
. |
- |
. |
ID=Dca33449.1.exon1;Parent=Dca33449.1 |
| scaffold3414 |
Augustus |
exon |
35669 |
35827 |
. |
- |
. |
ID=Dca33449.1.exon2;Parent=Dca33449.1 |
| scaffold3414 |
Augustus |
exon |
35914 |
36729 |
. |
- |
. |
ID=Dca33449.1.exon3;Parent=Dca33449.1 |
