Carnation DB

Dca33452.1

Annotation

5-exons
f-1
sp|F6HEF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g01910#GO:0003824;GO:0009116#1F1P0C
Os06t0112100-01 Nucleoside phosphorylase, family 1 domain containing protein.
Repeat List (scaffold3415)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33452.1	4	313	319	40.12	310	40	1e-55
Target_name	Start	End	Length	Cov(%)
sp\|F6HEF1_VITVI	70	387	394	80.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33452.1	25	313	319	31.66	289	33	1e-42
Target_name	Start	End	Length	Cov(%)
Os06t0112100-01	26	331	344	88.95

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3415	Augus-PASA	mRNA	21275	23885	.	+	.	ID=Dca33452.1;Parent=Dca33452
scaffold3415	Augus-PASA	exon	21275	21503	.	+	.	ID=Dca33452.1.exon1;Parent=Dca33452.1
scaffold3415	Augus-PASA	exon	21920	21987	.	+	.	ID=Dca33452.1.exon2;Parent=Dca33452.1
scaffold3415	Augus-PASA	exon	22135	22290	.	+	.	ID=Dca33452.1.exon3;Parent=Dca33452.1
scaffold3415	Augus-PASA	exon	22410	22751	.	+	.	ID=Dca33452.1.exon4;Parent=Dca33452.1
scaffold3415	Augus-PASA	exon	23721	23885	.	+	.	ID=Dca33452.1.exon5;Parent=Dca33452.1