Carnation DB

Dca33455.1

Annotation

5-exons
f-1
sp|A9PG61_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_573862#GO:0003824;GO:0009116#1F1P0C
AT4G24350.1 | Symbols: | Phosphorylase superfamily protein | chr4:12609637-12611328 FORWARD LENGTH=336
Repeat List (scaffold3415)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33455.1	6	308	321	36.44	303	37	4e-47
Target_name	Start	End	Length	Cov(%)
sp\|A9PG61_POPTR	13	327	339	92.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33455.1	8	313	321	32.71	306	33	1e-42
Target_name	Start	End	Length	Cov(%)
AT4G24350.1	11	335	336	96.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3415	Augustus	mRNA	52479	57368	.	+	.	ID=Dca33455.1;Parent=Dca33455
scaffold3415	Augustus	exon	52479	52710	.	+	.	ID=Dca33455.1.exon1;Parent=Dca33455.1
scaffold3415	Augustus	exon	52833	52900	.	+	.	ID=Dca33455.1.exon2;Parent=Dca33455.1
scaffold3415	Augustus	exon	53043	53198	.	+	.	ID=Dca33455.1.exon3;Parent=Dca33455.1
scaffold3415	Augustus	exon	53301	53639	.	+	.	ID=Dca33455.1.exon4;Parent=Dca33455.1
scaffold3415	Augustus	exon	57198	57368	.	+	.	ID=Dca33455.1.exon5;Parent=Dca33455.1