Carnation DB

Dca33459.1

Annotation

7-exons
f-1
sp|B9HSB7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_768814#unknown#0F0P0C
Repeat List (scaffold3416)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33459.1	1	129	166	46.38	129	60	3e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9HSB7_POPTR	1	128	148	86.48

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33459.1	3	138	166	43.37	136	53	1e-28
Target_name	Start	End	Length	Cov(%)
AT4G15790.1	5	132	147	87.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3416	Augus-PASA	mRNA	24254	27519	.	-	.	ID=Dca33459.1;Parent=Dca33459
scaffold3416	Augus-PASA	exon	24254	24418	.	-	.	ID=Dca33459.1.exon1;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	24667	24738	.	-	.	ID=Dca33459.1.exon2;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	24826	24879	.	-	.	ID=Dca33459.1.exon3;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	27011	27064	.	-	.	ID=Dca33459.1.exon4;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	27156	27209	.	-	.	ID=Dca33459.1.exon5;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	27311	27349	.	-	.	ID=Dca33459.1.exon6;Parent=Dca33459.1
scaffold3416	Augus-PASA	exon	27457	27519	.	-	.	ID=Dca33459.1.exon7;Parent=Dca33459.1