Carnation DB

Dca33476.1

Annotation

6-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os03t0643433-00 Similar to J013022N21, full insert sequence.
Repeat List (scaffold342)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33476.1	10	289	918	11.43	280	34	6e-48
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	672	988	1110	28.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33476.1	21	218	918	7.73	198	36	2e-30
Target_name	Start	End	Length	Cov(%)
Os03t0643433-00	206	403	644	30.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold342	Augustus	mRNA	12321	20984	.	+	.	ID=Dca33476.1;Parent=Dca33476
scaffold342	Augustus	exon	12321	12955	.	+	.	ID=Dca33476.1.exon1;Parent=Dca33476.1
scaffold342	Augustus	exon	13067	13303	.	+	.	ID=Dca33476.1.exon2;Parent=Dca33476.1
scaffold342	Augustus	exon	13505	13566	.	+	.	ID=Dca33476.1.exon3;Parent=Dca33476.1
scaffold342	Augustus	exon	16529	16941	.	+	.	ID=Dca33476.1.exon4;Parent=Dca33476.1
scaffold342	Augustus	exon	17101	17503	.	+	.	ID=Dca33476.1.exon5;Parent=Dca33476.1
scaffold342	Augustus	exon	19978	20984	.	+	.	ID=Dca33476.1.exon6;Parent=Dca33476.1