Dca33889.1
Annotation
- 2-exons
- f-1
- sp|Q2R4A2_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g29180#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3478)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33889.1 |
56 |
158 |
159 |
35.22 |
103 |
54 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R4A2_ORYSJ |
87 |
190 |
261 |
39.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33889.1 |
56 |
158 |
159 |
35.84 |
103 |
55 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
228 |
331 |
591 |
17.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3478 |
Augustus |
mRNA |
7792 |
8915 |
. |
+ |
. |
ID=Dca33889.1;Parent=Dca33889 |
| scaffold3478 |
Augustus |
exon |
7792 |
7983 |
. |
+ |
. |
ID=Dca33889.1.exon1;Parent=Dca33889.1 |
| scaffold3478 |
Augustus |
exon |
8628 |
8915 |
. |
+ |
. |
ID=Dca33889.1.exon2;Parent=Dca33889.1 |
