Carnation DB

Dca34069.1

Annotation

18-exons
f-1
sp|B9H264_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817772#GO:0005634#0F0P1C
AT4G21660.2 | Symbols: | proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=598
Repeat List (scaffold35)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34069.1	33	583	596	72.31	551	77	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H264_POPTR	9	570	585	96.06

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34069.1	105	583	596	64.93	479	80	0
Target_name	Start	End	Length	Cov(%)
Os02t0827300-01	86	568	583	82.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold35	Augustus	mRNA	219736	227096	.	-	.	ID=Dca34069.1;Parent=Dca34069
scaffold35	Augustus	exon	219736	219801	.	-	.	ID=Dca34069.1.exon1;Parent=Dca34069.1
scaffold35	Augustus	exon	219900	219969	.	-	.	ID=Dca34069.1.exon2;Parent=Dca34069.1
scaffold35	Augustus	exon	220162	220253	.	-	.	ID=Dca34069.1.exon3;Parent=Dca34069.1
scaffold35	Augustus	exon	220581	220626	.	-	.	ID=Dca34069.1.exon4;Parent=Dca34069.1
scaffold35	Augustus	exon	220727	220785	.	-	.	ID=Dca34069.1.exon5;Parent=Dca34069.1
scaffold35	Augustus	exon	220876	220957	.	-	.	ID=Dca34069.1.exon6;Parent=Dca34069.1
scaffold35	Augustus	exon	221372	221517	.	-	.	ID=Dca34069.1.exon7;Parent=Dca34069.1
scaffold35	Augustus	exon	221602	221664	.	-	.	ID=Dca34069.1.exon8;Parent=Dca34069.1
scaffold35	Augustus	exon	221827	221946	.	-	.	ID=Dca34069.1.exon9;Parent=Dca34069.1
scaffold35	Augustus	exon	222483	222584	.	-	.	ID=Dca34069.1.exon10;Parent=Dca34069.1
scaffold35	Augustus	exon	223287	223373	.	-	.	ID=Dca34069.1.exon11;Parent=Dca34069.1
scaffold35	Augustus	exon	223518	223610	.	-	.	ID=Dca34069.1.exon12;Parent=Dca34069.1
scaffold35	Augustus	exon	224340	224417	.	-	.	ID=Dca34069.1.exon13;Parent=Dca34069.1
scaffold35	Augustus	exon	224936	225043	.	-	.	ID=Dca34069.1.exon14;Parent=Dca34069.1
scaffold35	Augustus	exon	225587	225649	.	-	.	ID=Dca34069.1.exon15;Parent=Dca34069.1
scaffold35	Augustus	exon	225747	225872	.	-	.	ID=Dca34069.1.exon16;Parent=Dca34069.1
scaffold35	Augustus	exon	225971	226084	.	-	.	ID=Dca34069.1.exon17;Parent=Dca34069.1
scaffold35	Augustus	exon	226821	227096	.	-	.	ID=Dca34069.1.exon18;Parent=Dca34069.1