Dca34544.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold3567)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34544.1 |
41 |
455 |
455 |
38.02 |
415 |
41 |
3e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
179 |
581 |
1717 |
23.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34544.1 |
307 |
454 |
455 |
10.32 |
148 |
32 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
45 |
175 |
192 |
68.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3567 |
Augustus |
mRNA |
780 |
5110 |
. |
- |
. |
ID=Dca34544.1;Parent=Dca34544 |
| scaffold3567 |
Augustus |
exon |
780 |
1999 |
. |
- |
. |
ID=Dca34544.1.exon1;Parent=Dca34544.1 |
| scaffold3567 |
Augustus |
exon |
4380 |
4464 |
. |
- |
. |
ID=Dca34544.1.exon2;Parent=Dca34544.1 |
| scaffold3567 |
Augustus |
exon |
5048 |
5110 |
. |
- |
. |
ID=Dca34544.1.exon3;Parent=Dca34544.1 |
