Dca34590.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold3571)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34590.1 |
1 |
931 |
954 |
55.97 |
931 |
52 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
128 |
1147 |
1717 |
59.4 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34590.1 |
646 |
931 |
954 |
10.37 |
286 |
35 |
9e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
503 |
707 |
37.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3571 |
Augustus |
mRNA |
29659 |
32890 |
. |
+ |
. |
ID=Dca34590.1;Parent=Dca34590 |
| scaffold3571 |
Augustus |
exon |
29659 |
30057 |
. |
+ |
. |
ID=Dca34590.1.exon1;Parent=Dca34590.1 |
| scaffold3571 |
Augustus |
exon |
30196 |
30930 |
. |
+ |
. |
ID=Dca34590.1.exon2;Parent=Dca34590.1 |
| scaffold3571 |
Augustus |
exon |
31023 |
31475 |
. |
+ |
. |
ID=Dca34590.1.exon3;Parent=Dca34590.1 |
| scaffold3571 |
Augustus |
exon |
31613 |
32890 |
. |
+ |
. |
ID=Dca34590.1.exon4;Parent=Dca34590.1 |
