Dca34626.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold3578)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34626.1 |
39 |
452 |
452 |
36.94 |
414 |
40 |
1e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
281 |
687 |
1499 |
27.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34626.1 |
146 |
452 |
452 |
25.88 |
307 |
38 |
2e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
35 |
335 |
707 |
42.57 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3578 |
Augustus |
mRNA |
8367 |
10390 |
. |
- |
. |
ID=Dca34626.1;Parent=Dca34626 |
| scaffold3578 |
Augustus |
exon |
8367 |
9571 |
. |
- |
. |
ID=Dca34626.1.exon1;Parent=Dca34626.1 |
| scaffold3578 |
Augustus |
exon |
10237 |
10390 |
. |
- |
. |
ID=Dca34626.1.exon2;Parent=Dca34626.1 |
