Dca34637.1
Annotation
- 2-exons
- f-1
- sp|Q94I66_ORYSJ#Putative copia-like retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0084C09.5#unknown#0F0P0C
- Repeat List (scaffold358)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34637.1 |
324 |
439 |
817 |
8.32 |
116 |
59 |
4e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q94I66_ORYSJ |
1 |
116 |
809 |
14.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34637.1 |
336 |
433 |
817 |
5.87 |
98 |
49 |
5e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1212 |
1309 |
1401 |
6.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold358 |
Augustus |
mRNA |
4229 |
8835 |
. |
- |
. |
ID=Dca34637.1;Parent=Dca34637 |
| scaffold358 |
Augustus |
exon |
4229 |
5379 |
. |
- |
. |
ID=Dca34637.1.exon1;Parent=Dca34637.1 |
| scaffold358 |
Augustus |
exon |
7533 |
8835 |
. |
- |
. |
ID=Dca34637.1.exon2;Parent=Dca34637.1 |
