Carnation DB

Dca34645.1

Annotation

8-exons
f-1
sp|E0CVM6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_10s0116g00790#GO:0009982;GO:0003723;GO:0001522#2F1P0C
sp|B9RXP6_RICCO#Ribosomal pseudouridine synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0905350#GO:0009982;GO:0003723;GO:0001522#2F1P0C
Repeat List (scaffold358)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34645.1	79	430	431	61.02	352	75	2e-161
Target_name	Start	End	Length	Cov(%)
sp\|E0CVM6_VITVI	120	471	472	74.57

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34645.1	79	431	431	58.23	353	71	1e-154
Target_name	Start	End	Length	Cov(%)
AT4G21770.1	117	472	472	75.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold358	Augustus	mRNA	46084	49660	.	-	.	ID=Dca34645.1;Parent=Dca34645
scaffold358	Augustus	exon	46084	46356	.	-	.	ID=Dca34645.1.exon1;Parent=Dca34645.1
scaffold358	Augustus	exon	46805	46974	.	-	.	ID=Dca34645.1.exon2;Parent=Dca34645.1
scaffold358	Augustus	exon	47118	47229	.	-	.	ID=Dca34645.1.exon3;Parent=Dca34645.1
scaffold358	Augustus	exon	47421	47475	.	-	.	ID=Dca34645.1.exon4;Parent=Dca34645.1
scaffold358	Augustus	exon	47558	47673	.	-	.	ID=Dca34645.1.exon5;Parent=Dca34645.1
scaffold358	Augustus	exon	47905	47986	.	-	.	ID=Dca34645.1.exon6;Parent=Dca34645.1
scaffold358	Augustus	exon	48070	48324	.	-	.	ID=Dca34645.1.exon7;Parent=Dca34645.1
scaffold358	Augustus	exon	49428	49660	.	-	.	ID=Dca34645.1.exon8;Parent=Dca34645.1