Carnation DB

Dca34691.1

Annotation

10-exons
f-1
sp|F6GSM9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g02300#GO:0000784;GO:0000723#0F1P1C
sp|B7T1J5_POPTR#Protection of telomeres 1 protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0000784;GO:0003677;GO:0000723#1F1P1C
Repeat List (scaffold3587)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34691.1	18	474	475	51.15	457	53	9e-142
Target_name	Start	End	Length	Cov(%)
sp\|F6GSM9_VITVI	1	453	454	99.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34691.1	7	473	475	40	467	41	7e-84
Target_name	Start	End	Length	Cov(%)
AT5G06310.1	1	451	454	99.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3587	Augus-PASA	mRNA	18983	24189	.	+	.	ID=Dca34691.1;Parent=Dca34691
scaffold3587	Augus-PASA	exon	18983	19130	.	+	.	ID=Dca34691.1.exon1;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	20457	20593	.	+	.	ID=Dca34691.1.exon2;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	21170	21359	.	+	.	ID=Dca34691.1.exon3;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	22200	22276	.	+	.	ID=Dca34691.1.exon4;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	22438	22526	.	+	.	ID=Dca34691.1.exon5;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	22744	23025	.	+	.	ID=Dca34691.1.exon6;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	23145	23221	.	+	.	ID=Dca34691.1.exon7;Parent=Dca34691.1
scaffold3587	Augus-PASA	exon	23319	23383	.	+	.	ID=Dca34691.1.exon8;Parent=Dca34691.1
scaffold3587	Augustus	exon	23719	23871	.	+	.	ID=Dca34691.1.exon9;Parent=Dca34691.1
scaffold3587	Augustus	exon	23980	24189	.	+	.	ID=Dca34691.1.exon10;Parent=Dca34691.1
scaffold3587	Augus-PASA	mRNA	18983	24189	.	+	.	ID=Dca34691.2;Parent=Dca34691
scaffold3587	Augus-PASA	exon	18983	19130	.	+	.	ID=Dca34691.2.exon1;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	20457	20593	.	+	.	ID=Dca34691.2.exon2;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	21170	21359	.	+	.	ID=Dca34691.2.exon3;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	22200	22264	.	+	.	ID=Dca34691.2.exon4;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	22438	22526	.	+	.	ID=Dca34691.2.exon5;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	22744	23025	.	+	.	ID=Dca34691.2.exon6;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	23145	23221	.	+	.	ID=Dca34691.2.exon7;Parent=Dca34691.2
scaffold3587	Augus-PASA	exon	23319	23383	.	+	.	ID=Dca34691.2.exon8;Parent=Dca34691.2
scaffold3587	Augustus	exon	23719	23871	.	+	.	ID=Dca34691.2.exon9;Parent=Dca34691.2
scaffold3587	Augustus	exon	23980	24189	.	+	.	ID=Dca34691.2.exon10;Parent=Dca34691.2