Dca34753.1
Annotation
- 3-exons
- f-1
- sp|Q9LVQ1_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold3594)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34753.1 |
72 |
200 |
245 |
17.14 |
129 |
32 |
4e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ1_ARATH |
903 |
1030 |
1072 |
11.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34753.1 |
76 |
222 |
245 |
20 |
147 |
33 |
6e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G02520.1 |
37 |
183 |
211 |
69.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3594 |
Augustus |
mRNA |
8001 |
8955 |
. |
- |
. |
ID=Dca34753.1;Parent=Dca34753 |
| scaffold3594 |
Augustus |
exon |
8001 |
8517 |
. |
- |
. |
ID=Dca34753.1.exon1;Parent=Dca34753.1 |
| scaffold3594 |
Augustus |
exon |
8607 |
8640 |
. |
- |
. |
ID=Dca34753.1.exon2;Parent=Dca34753.1 |
| scaffold3594 |
Augustus |
exon |
8769 |
8955 |
. |
- |
. |
ID=Dca34753.1.exon3;Parent=Dca34753.1 |
