Carnation DB

Dca34775.1

Annotation

6-exons
f-1
sp|B9MU42_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_739824#GO:0003676;GO:0000166#2F0P0C
AT5G46840.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:19005651-19007609 FORWARD LENGTH=501
Repeat List (scaffold3599)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34775.1	17	516	518	54.05	500	55	4e-128
Target_name	Start	End	Length	Cov(%)
sp\|B9MU42_POPTR	24	485	487	94.86

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34775.1	3	516	518	51.73	514	51	4e-104
Target_name	Start	End	Length	Cov(%)
AT5G46840.1	4	500	501	99.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3599	Augus-PASA	mRNA	14237	17394	.	-	.	ID=Dca34775.1;Parent=Dca34775
scaffold3599	Augus-PASA	exon	14237	14740	.	-	.	ID=Dca34775.1.exon1;Parent=Dca34775.1
scaffold3599	Augus-PASA	exon	14832	14960	.	-	.	ID=Dca34775.1.exon2;Parent=Dca34775.1
scaffold3599	Augus-PASA	exon	15064	15195	.	-	.	ID=Dca34775.1.exon3;Parent=Dca34775.1
scaffold3599	Augus-PASA	exon	15297	15366	.	-	.	ID=Dca34775.1.exon4;Parent=Dca34775.1
scaffold3599	Augustus	exon	16566	16624	.	-	.	ID=Dca34775.1.exon5;Parent=Dca34775.1
scaffold3599	Augustus	exon	16732	17394	.	-	.	ID=Dca34775.1.exon6;Parent=Dca34775.1