Carnation DB

Dca34783.1

Annotation

9-exons
f-1
sp|F6HJJ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0373g00040#GO:0030060;GO:0000166;GO:0005975;GO:0006108#2F2P0C
sp|B9S7S1_RICCO#Malate dehydrogenase#Ricinus communis (Castor bean)#ORFNames=RCOM_1381350#GO:0030060;GO:0000166;GO:0044262;GO:0006108;GO:0006099#2F3P0C
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34783.1	5	358	358	83.79	354	85	2e-175
Target_name	Start	End	Length	Cov(%)
sp\|F6HJJ4_VITVI	82	434	434	81.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34783.1	7	358	358	77.93	352	80	2e-165
Target_name	Start	End	Length	Cov(%)
AT2G22780.1	2	354	354	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	48427	51891	.	-	.	ID=Dca34783.1;Parent=Dca34783
scaffold36	Augus-PASA	exon	48427	48499	.	-	.	ID=Dca34783.1.exon1;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	48732	48826	.	-	.	ID=Dca34783.1.exon2;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	49081	49170	.	-	.	ID=Dca34783.1.exon3;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	49384	49419	.	-	.	ID=Dca34783.1.exon4;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	49664	49747	.	-	.	ID=Dca34783.1.exon5;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	49836	49925	.	-	.	ID=Dca34783.1.exon6;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	50321	50635	.	-	.	ID=Dca34783.1.exon7;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	51317	51535	.	-	.	ID=Dca34783.1.exon8;Parent=Dca34783.1
scaffold36	Augus-PASA	exon	51817	51891	.	-	.	ID=Dca34783.1.exon9;Parent=Dca34783.1