Carnation DB

Dca34791.1

Annotation

5-exons
f-1
sp|B9H856_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_559520#unknown#0F0P0C
AT5G08560.1 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:2771104-2773827 REVERSE LENGTH=589
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34791.1	21	594	598	64.04	574	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9H856_POPTR	4	579	581	99.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34791.1	21	595	598	56.68	575	58	0
Target_name	Start	End	Length	Cov(%)
AT5G08560.1	4	589	589	99.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augustus	mRNA	108784	113379	.	-	.	ID=Dca34791.1;Parent=Dca34791
scaffold36	Augustus	exon	108784	109005	.	-	.	ID=Dca34791.1.exon1;Parent=Dca34791.1
scaffold36	Augustus	exon	109357	109983	.	-	.	ID=Dca34791.1.exon2;Parent=Dca34791.1
scaffold36	Augustus	exon	110910	111011	.	-	.	ID=Dca34791.1.exon3;Parent=Dca34791.1
scaffold36	Augustus	exon	112235	113022	.	-	.	ID=Dca34791.1.exon4;Parent=Dca34791.1
scaffold36	Augustus	exon	113322	113379	.	-	.	ID=Dca34791.1.exon5;Parent=Dca34791.1