Carnation DB

Dca34812.1

Annotation

8-exons
f-1
sp|D7TAF6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0010g01680#GO:0009055;GO:0015035;GO:0045454;GO:0035556#2F2P0C
sp|B9RY43_RICCO#Electron transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0814310#GO:0009055;GO:0015035;GO:0045454;GO:0035556#2F2P0C
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34812.1	48	547	573	55.32	500	62	0
Target_name	Start	End	Length	Cov(%)
sp\|D7TAF6_VITVI	17	521	546	92.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34812.1	9	547	573	50.78	539	52	6e-161
Target_name	Start	End	Length	Cov(%)
AT3G11920.1	55	604	630	87.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augustus	mRNA	245457	252349	.	-	.	ID=Dca34812.1;Parent=Dca34812
scaffold36	Augustus	exon	245457	245539	.	-	.	ID=Dca34812.1.exon1;Parent=Dca34812.1
scaffold36	Augustus	exon	246130	246203	.	-	.	ID=Dca34812.1.exon2;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	246534	246730	.	-	.	ID=Dca34812.1.exon3;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	247207	247498	.	-	.	ID=Dca34812.1.exon4;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	247811	248041	.	-	.	ID=Dca34812.1.exon5;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	248121	248176	.	-	.	ID=Dca34812.1.exon6;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	250680	251118	.	-	.	ID=Dca34812.1.exon7;Parent=Dca34812.1
scaffold36	Augus-PASA	exon	252000	252349	.	-	.	ID=Dca34812.1.exon8;Parent=Dca34812.1