Carnation DB

Dca34817.1

Annotation

11-exons
f-1
sp|D7TB63_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02050#GO:0005634;GO:0006334#0F1P1C
sp|Q8L8G5_MAIZE#Nucleosome/chromatin assembly factor group A#Zea mays (Maize)#Name=nfa102#GO:0005634;GO:0006334#0F1P1C
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34817.1	16	372	372	67.47	357	67	5e-116
Target_name	Start	End	Length	Cov(%)
sp\|D7TB63_VITVI	22	386	386	94.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34817.1	7	372	372	65.05	366	64	4e-110
Target_name	Start	End	Length	Cov(%)
Os05t0539700-01	6	364	365	98.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	289233	292423	.	+	.	ID=Dca34817.1;Parent=Dca34817
scaffold36	Augus-PASA	exon	289233	289281	.	+	.	ID=Dca34817.1.exon1;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	289378	289412	.	+	.	ID=Dca34817.1.exon2;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	289674	289751	.	+	.	ID=Dca34817.1.exon3;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	290470	290562	.	+	.	ID=Dca34817.1.exon4;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	290992	291076	.	+	.	ID=Dca34817.1.exon5;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	291168	291229	.	+	.	ID=Dca34817.1.exon6;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	291329	291543	.	+	.	ID=Dca34817.1.exon7;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	291627	291804	.	+	.	ID=Dca34817.1.exon8;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	291893	291936	.	+	.	ID=Dca34817.1.exon9;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	292035	292242	.	+	.	ID=Dca34817.1.exon10;Parent=Dca34817.1
scaffold36	Augus-PASA	exon	292352	292423	.	+	.	ID=Dca34817.1.exon11;Parent=Dca34817.1