Carnation DB

Dca34826.1

Annotation

6-exons
f-1
sp|B9T6M4_RICCO#Peptide transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0098850#GO:0016021;GO:0005215;GO:0006857#1F1P1C
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34826.1	228	751	770	36.36	524	52	7e-159
Target_name	Start	End	Length	Cov(%)
sp\|B9T6M4_RICCO	3	547	1121	48.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34826.1	3	202	770	13.37	200	52	2e-56
Target_name	Start	End	Length	Cov(%)
AT2G02040.1	378	577	585	34.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	361905	365609	.	-	.	ID=Dca34826.1;Parent=Dca34826
scaffold36	Augus-PASA	exon	361905	362679	.	-	.	ID=Dca34826.1.exon1;Parent=Dca34826.1
scaffold36	Augustus	exon	362828	363366	.	-	.	ID=Dca34826.1.exon2;Parent=Dca34826.1
scaffold36	Augustus	exon	363449	363666	.	-	.	ID=Dca34826.1.exon3;Parent=Dca34826.1
scaffold36	Augustus	exon	363754	363868	.	-	.	ID=Dca34826.1.exon4;Parent=Dca34826.1
scaffold36	Augustus	exon	364813	364873	.	-	.	ID=Dca34826.1.exon5;Parent=Dca34826.1
scaffold36	Augustus	exon	365005	365609	.	-	.	ID=Dca34826.1.exon6;Parent=Dca34826.1