Carnation DB

Dca34827.1

Annotation

5-exons
f-1
sp|B9S7C1_RICCO#Peptide transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0776160#GO:0016021;GO:0005215;GO:0006857#1F1P1C
Repeat List (scaffold36)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34827.1	1	584	584	81.5	584	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9S7C1_RICCO	1	585	585	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34827.1	16	584	584	72.77	569	75	0
Target_name	Start	End	Length	Cov(%)
Os03t0719900-04	25	593	594	95.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold36	Augus-PASA	mRNA	366764	370687	.	-	.	ID=Dca34827.1;Parent=Dca34827
scaffold36	Augus-PASA	exon	366764	367586	.	-	.	ID=Dca34827.1.exon1;Parent=Dca34827.1
scaffold36	Augus-PASA	exon	367762	368318	.	-	.	ID=Dca34827.1.exon2;Parent=Dca34827.1
scaffold36	Augus-PASA	exon	368531	368748	.	-	.	ID=Dca34827.1.exon3;Parent=Dca34827.1
scaffold36	Augus-PASA	exon	368844	368946	.	-	.	ID=Dca34827.1.exon4;Parent=Dca34827.1
scaffold36	Augus-PASA	exon	370634	370687	.	-	.	ID=Dca34827.1.exon5;Parent=Dca34827.1