Carnation DB

Dca34877.1

Annotation

3-exons
f-1
sp|B9H1F7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_858253#GO:0005622;GO:0008270#1F0P1C
AT4G04885.1 | Symbols: PCFS4 | PCF11P-similar protein 4 | chr4:2472083-2475417 FORWARD LENGTH=808
Repeat List (scaffold360)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34877.1	1	577	581	48.88	577	41	6e-112
Target_name	Start	End	Length	Cov(%)
sp\|B9H1F7_POPTR	168	826	841	78.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34877.1	1	184	581	13.76	184	35	6e-20
Target_name	Start	End	Length	Cov(%)
AT4G04885.1	162	384	808	27.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold360	Augustus	mRNA	232533	234770	.	-	.	ID=Dca34877.1;Parent=Dca34877
scaffold360	Augustus	exon	232533	233063	.	-	.	ID=Dca34877.1.exon1;Parent=Dca34877.1
scaffold360	Augustus	exon	233268	233825	.	-	.	ID=Dca34877.1.exon2;Parent=Dca34877.1
scaffold360	Augustus	exon	234114	234770	.	-	.	ID=Dca34877.1.exon3;Parent=Dca34877.1
scaffold360	Augustus	mRNA	232533	235777	.	-	.	ID=Dca34877.2;Parent=Dca34877
scaffold360	Augustus	exon	232533	233063	.	-	.	ID=Dca34877.2.exon1;Parent=Dca34877.2
scaffold360	Augustus	exon	233268	233825	.	-	.	ID=Dca34877.2.exon2;Parent=Dca34877.2
scaffold360	Augustus	exon	234114	234818	.	-	.	ID=Dca34877.2.exon3;Parent=Dca34877.2
scaffold360	Augustus	exon	235043	235144	.	-	.	ID=Dca34877.2.exon4;Parent=Dca34877.2
scaffold360	Augustus	exon	235538	235777	.	-	.	ID=Dca34877.2.exon5;Parent=Dca34877.2