Dca34891.1
Annotation
- 4-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3601)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34891.1 |
1 |
521 |
538 |
42.93 |
521 |
45 |
3e-113
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
140 |
583 |
964 |
46.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34891.1 |
7 |
513 |
538 |
31.04 |
507 |
33 |
7e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
537 |
1019 |
1401 |
34.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3601 |
Augustus |
mRNA |
33660 |
35551 |
. |
+ |
. |
ID=Dca34891.1;Parent=Dca34891 |
| scaffold3601 |
Augustus |
exon |
33660 |
34486 |
. |
+ |
. |
ID=Dca34891.1.exon1;Parent=Dca34891.1 |
| scaffold3601 |
Augustus |
exon |
34571 |
34700 |
. |
+ |
. |
ID=Dca34891.1.exon2;Parent=Dca34891.1 |
| scaffold3601 |
Augustus |
exon |
34789 |
35394 |
. |
+ |
. |
ID=Dca34891.1.exon3;Parent=Dca34891.1 |
| scaffold3601 |
Augustus |
exon |
35498 |
35551 |
. |
+ |
. |
ID=Dca34891.1.exon4;Parent=Dca34891.1 |
