Carnation DB

Dca34956.1

Annotation

18-exons
f-1
sp|Q8GUB1_MESCR#Putative vacuolar ATPase subunit 100 kDa subunit#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=vpha-a#GO:0033177;GO:0015078;GO:0016787;GO:0015991#2F1P1C
Repeat List (scaffold3611)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34956.1	1	814	814	85.87	814	86	0
Target_name	Start	End	Length	Cov(%)
sp\|Q8GUB1_MESCR	1	816	816	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34956.1	10	814	814	78.74	805	80	0
Target_name	Start	End	Length	Cov(%)
AT4G39080.1	14	821	821	98.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3611	Augustus	mRNA	18164	25207	.	+	.	ID=Dca34956.1;Parent=Dca34956
scaffold3611	Augustus	exon	18164	18304	.	+	.	ID=Dca34956.1.exon1;Parent=Dca34956.1
scaffold3611	Augustus	exon	20091	20135	.	+	.	ID=Dca34956.1.exon2;Parent=Dca34956.1
scaffold3611	Augustus	exon	20489	20611	.	+	.	ID=Dca34956.1.exon3;Parent=Dca34956.1
scaffold3611	Augustus	exon	20729	20858	.	+	.	ID=Dca34956.1.exon4;Parent=Dca34956.1
scaffold3611	Augustus	exon	21127	21206	.	+	.	ID=Dca34956.1.exon5;Parent=Dca34956.1
scaffold3611	Augustus	exon	21283	21456	.	+	.	ID=Dca34956.1.exon6;Parent=Dca34956.1
scaffold3611	Augustus	exon	21650	21787	.	+	.	ID=Dca34956.1.exon7;Parent=Dca34956.1
scaffold3611	Augustus	exon	22080	22187	.	+	.	ID=Dca34956.1.exon8;Parent=Dca34956.1
scaffold3611	Augustus	exon	22322	22429	.	+	.	ID=Dca34956.1.exon9;Parent=Dca34956.1
scaffold3611	Augustus	exon	22533	22681	.	+	.	ID=Dca34956.1.exon10;Parent=Dca34956.1
scaffold3611	Augustus	exon	22923	23076	.	+	.	ID=Dca34956.1.exon11;Parent=Dca34956.1
scaffold3611	Augustus	exon	23292	23452	.	+	.	ID=Dca34956.1.exon12;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	23536	23742	.	+	.	ID=Dca34956.1.exon13;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	23857	24040	.	+	.	ID=Dca34956.1.exon14;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	24188	24271	.	+	.	ID=Dca34956.1.exon15;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	24378	24571	.	+	.	ID=Dca34956.1.exon16;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	24813	24872	.	+	.	ID=Dca34956.1.exon17;Parent=Dca34956.1
scaffold3611	Augus-PASA	exon	25003	25207	.	+	.	ID=Dca34956.1.exon18;Parent=Dca34956.1