Dca34965.1
Annotation
- 3-exons
- f-1
- sp|Q0ZCB7_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3613)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34965.1 |
2 |
220 |
685 |
19.12 |
219 |
60 |
8e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCB7_POPTR |
652 |
867 |
1332 |
16.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34965.1 |
14 |
88 |
685 |
4.37 |
75 |
40 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
921 |
995 |
1539 |
4.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3613 |
Augustus |
mRNA |
27146 |
31980 |
. |
- |
. |
ID=Dca34965.1;Parent=Dca34965 |
| scaffold3613 |
Augustus |
exon |
27146 |
28460 |
. |
- |
. |
ID=Dca34965.1.exon1;Parent=Dca34965.1 |
| scaffold3613 |
Augustus |
exon |
29007 |
29091 |
. |
- |
. |
ID=Dca34965.1.exon2;Parent=Dca34965.1 |
| scaffold3613 |
Augustus |
exon |
31323 |
31980 |
. |
- |
. |
ID=Dca34965.1.exon3;Parent=Dca34965.1 |
