Dca34991.1
Annotation
- 3-exons
- f-1
- sp|O48577_ARATH#Putative polygalacturonase#Arabidopsis thaliana (Mouse-ear cress)#Name=T19K24.6#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold3619)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34991.1 |
1 |
62 |
193 |
19.68 |
62 |
62 |
4e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O48577_ARATH |
170 |
231 |
381 |
16.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34991.1 |
1 |
62 |
193 |
19.68 |
62 |
62 |
5e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G44830.1 |
121 |
182 |
332 |
18.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3619 |
Augustus |
mRNA |
7620 |
9636 |
. |
- |
. |
ID=Dca34991.1;Parent=Dca34991 |
| scaffold3619 |
Augustus |
exon |
7620 |
8013 |
. |
- |
. |
ID=Dca34991.1.exon1;Parent=Dca34991.1 |
| scaffold3619 |
Augustus |
exon |
8907 |
8988 |
. |
- |
. |
ID=Dca34991.1.exon2;Parent=Dca34991.1 |
| scaffold3619 |
Augustus |
exon |
9531 |
9636 |
. |
- |
. |
ID=Dca34991.1.exon3;Parent=Dca34991.1 |
