Carnation DB

Dca34992.1

Annotation

13-exons
f-1
sp|F6H316_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g05330#GO:0005524;GO:0008026;GO:0003676#3F0P0C
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein | chr5:3553334-3556646 FORWARD LENGTH=427
Repeat List (scaffold3619)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34992.1	1	426	523	76.29	426	94	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H316_VITVI	1	426	457	93.21

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34992.1	1	425	523	74.56	425	92	0
Target_name	Start	End	Length	Cov(%)
AT5G11170.1	1	424	427	99.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3619	Augustus	mRNA	14466	21487	.	-	.	ID=Dca34992.1;Parent=Dca34992
scaffold3619	Augustus	exon	14466	14605	.	-	.	ID=Dca34992.1.exon1;Parent=Dca34992.1
scaffold3619	Augustus	exon	16481	16586	.	-	.	ID=Dca34992.1.exon2;Parent=Dca34992.1
scaffold3619	Augustus	exon	16991	17040	.	-	.	ID=Dca34992.1.exon3;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	17155	17218	.	-	.	ID=Dca34992.1.exon4;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	17327	17410	.	-	.	ID=Dca34992.1.exon5;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	17520	17664	.	-	.	ID=Dca34992.1.exon6;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	18145	18329	.	-	.	ID=Dca34992.1.exon7;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	18415	18471	.	-	.	ID=Dca34992.1.exon8;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	19162	19280	.	-	.	ID=Dca34992.1.exon9;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	19415	19646	.	-	.	ID=Dca34992.1.exon10;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	19760	19932	.	-	.	ID=Dca34992.1.exon11;Parent=Dca34992.1
scaffold3619	Augus-PASA	exon	20334	20434	.	-	.	ID=Dca34992.1.exon12;Parent=Dca34992.1
scaffold3619	Augustus	exon	21372	21487	.	-	.	ID=Dca34992.1.exon13;Parent=Dca34992.1