Carnation DB

Dca3505.1

Annotation

6-exons
f-1
sp|B9HKH1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721099#GO:0008270#1F0P0C
AT4G14365.1 | Symbols: XBAT34 | XB3 ortholog 4 in Arabidopsis thaliana | chr4:8271660-8273685 REVERSE LENGTH=376
Repeat List (scaffold1125)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3505.1	1	322	322	55.59	322	40	8e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9HKH1_POPTR	1	442	442	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3505.1	1	322	322	39.44	322	33	2e-43
Target_name	Start	End	Length	Cov(%)
AT4G14365.1	1	376	376	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1125	Augustus	mRNA	26576	30183	.	+	.	ID=Dca3505.1;Parent=Dca3505
scaffold1125	Augustus	exon	26576	26677	.	+	.	ID=Dca3505.1.exon1;Parent=Dca3505.1
scaffold1125	Augustus	exon	27834	27948	.	+	.	ID=Dca3505.1.exon2;Parent=Dca3505.1
scaffold1125	Augustus	exon	28494	28582	.	+	.	ID=Dca3505.1.exon3;Parent=Dca3505.1
scaffold1125	Augustus	exon	29219	29321	.	+	.	ID=Dca3505.1.exon4;Parent=Dca3505.1
scaffold1125	Augustus	exon	29495	29580	.	+	.	ID=Dca3505.1.exon5;Parent=Dca3505.1
scaffold1125	Augustus	exon	29710	30183	.	+	.	ID=Dca3505.1.exon6;Parent=Dca3505.1