Dca35200.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold36491)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35200.1 |
1 |
224 |
228 |
72.36 |
224 |
67 |
2e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
895 |
896 |
27.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35200.1 |
27 |
213 |
228 |
30.7 |
187 |
34 |
7e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1384 |
1401 |
14.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold36491 |
Augustus |
mRNA |
11 |
763 |
. |
+ |
. |
ID=Dca35200.1;Parent=Dca35200 |
| scaffold36491 |
Augustus |
exon |
11 |
171 |
. |
+ |
. |
ID=Dca35200.1.exon1;Parent=Dca35200.1 |
| scaffold36491 |
Augustus |
exon |
238 |
763 |
. |
+ |
. |
ID=Dca35200.1.exon2;Parent=Dca35200.1 |
