Carnation DB

Dca3549.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q9SHM3_ARATH#F7F22.17#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold1127)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3549.1	94	666	746	36.32	573	42	1e-108
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	73	701	1717	36.63

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3549.1	467	559	746	3.88	93	32	4e-07
Target_name	Start	End	Length	Cov(%)
Os12t0292200-01	98	189	192	47.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1127	Augustus	mRNA	50787	53489	.	+	.	ID=Dca3549.1;Parent=Dca3549
scaffold1127	Augustus	exon	50787	51069	.	+	.	ID=Dca3549.1.exon1;Parent=Dca3549.1
scaffold1127	Augustus	exon	51195	51429	.	+	.	ID=Dca3549.1.exon2;Parent=Dca3549.1
scaffold1127	Augustus	exon	51520	52351	.	+	.	ID=Dca3549.1.exon3;Parent=Dca3549.1
scaffold1127	Augustus	exon	52433	53051	.	+	.	ID=Dca3549.1.exon4;Parent=Dca3549.1
scaffold1127	Augustus	exon	53218	53489	.	+	.	ID=Dca3549.1.exon5;Parent=Dca3549.1