Dca3564.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1128)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3564.1 |
1 |
841 |
844 |
67.18 |
841 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
1291 |
1717 |
53.46 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3564.1 |
506 |
814 |
844 |
13.74 |
309 |
31 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
29 |
387 |
591 |
60.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1128 |
Augustus |
mRNA |
38084 |
40936 |
. |
+ |
. |
ID=Dca3564.1;Parent=Dca3564 |
| scaffold1128 |
Augustus |
exon |
38084 |
38890 |
. |
+ |
. |
ID=Dca3564.1.exon1;Parent=Dca3564.1 |
| scaffold1128 |
Augustus |
exon |
38990 |
39981 |
. |
+ |
. |
ID=Dca3564.1.exon2;Parent=Dca3564.1 |
| scaffold1128 |
Augustus |
exon |
40093 |
40208 |
. |
+ |
. |
ID=Dca3564.1.exon3;Parent=Dca3564.1 |
| scaffold1128 |
Augustus |
exon |
40317 |
40936 |
. |
+ |
. |
ID=Dca3564.1.exon4;Parent=Dca3564.1 |
