Dca35729.1
Annotation
- 4-exons
- f-1
- sp|Q53JE1_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class#Oryza sativa subsp japonica (Rice)#OrderedLocusNames=LOC_Os11g26320#unknown#0F0P0C
- Repeat List (scaffold3729)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35729.1 |
4 |
601 |
635 |
48.5 |
598 |
48 |
1e-160
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q53JE1_ORYSJ |
63 |
705 |
1044 |
61.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35729.1 |
1 |
594 |
635 |
34.48 |
594 |
34 |
3e-99
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
54 |
684 |
829 |
76.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3729 |
Augustus |
mRNA |
18428 |
20767 |
. |
+ |
. |
ID=Dca35729.1;Parent=Dca35729 |
| scaffold3729 |
Augustus |
exon |
18428 |
19609 |
. |
+ |
. |
ID=Dca35729.1.exon1;Parent=Dca35729.1 |
| scaffold3729 |
Augustus |
exon |
19712 |
20284 |
. |
+ |
. |
ID=Dca35729.1.exon2;Parent=Dca35729.1 |
| scaffold3729 |
Augustus |
exon |
20522 |
20600 |
. |
+ |
. |
ID=Dca35729.1.exon3;Parent=Dca35729.1 |
| scaffold3729 |
Augustus |
exon |
20694 |
20767 |
. |
+ |
. |
ID=Dca35729.1.exon4;Parent=Dca35729.1 |
