Dca35808.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold3740)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35808.1 |
79 |
169 |
169 |
33.72 |
91 |
63 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
235 |
325 |
964 |
9.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35808.1 |
79 |
160 |
169 |
20.71 |
82 |
43 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
649 |
731 |
1428 |
5.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3740 |
Augustus |
mRNA |
783 |
2196 |
. |
- |
. |
ID=Dca35808.1;Parent=Dca35808 |
| scaffold3740 |
Augustus |
exon |
783 |
1020 |
. |
- |
. |
ID=Dca35808.1.exon1;Parent=Dca35808.1 |
| scaffold3740 |
Augustus |
exon |
1824 |
1854 |
. |
- |
. |
ID=Dca35808.1.exon2;Parent=Dca35808.1 |
| scaffold3740 |
Augustus |
exon |
1956 |
2196 |
. |
- |
. |
ID=Dca35808.1.exon3;Parent=Dca35808.1 |
