Dca35862.1
Annotation
- 2-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3750)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35862.1 |
44 |
118 |
120 |
35.83 |
75 |
58 |
7e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
1110 |
1184 |
1184 |
6.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35862.1 |
44 |
104 |
120 |
21.66 |
61 |
43 |
7e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1323 |
1383 |
1401 |
4.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3750 |
Augustus |
mRNA |
581 |
3901 |
. |
+ |
. |
ID=Dca35862.1;Parent=Dca35862 |
| scaffold3750 |
Augustus |
exon |
581 |
710 |
. |
+ |
. |
ID=Dca35862.1.exon1;Parent=Dca35862.1 |
| scaffold3750 |
Augustus |
exon |
3669 |
3901 |
. |
+ |
. |
ID=Dca35862.1.exon2;Parent=Dca35862.1 |
