Carnation DB

Dca3605.1

Annotation

5-exons
f-1
sp|F6HJC4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g01620#GO:0016772#1F0P0C
sp|B9SMA1_RICCO#Protein ABC1, mitochondrial, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0297470#GO:0005524;GO:0004672#2F0P0C
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3605.1	39	259	270	58.88	221	72	3e-89
Target_name	Start	End	Length	Cov(%)
sp\|F6HJC4_VITVI	42	264	703	31.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3605.1	8	259	270	55.18	252	60	2e-80
Target_name	Start	End	Length	Cov(%)
AT1G71810.1	14	256	692	35.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	20257	22179	.	+	.	ID=Dca3605.1;Parent=Dca3605
scaffold113	Augustus	exon	20257	20616	.	+	.	ID=Dca3605.1.exon1;Parent=Dca3605.1
scaffold113	Augustus	exon	20781	20825	.	+	.	ID=Dca3605.1.exon2;Parent=Dca3605.1
scaffold113	Augustus	exon	20911	20949	.	+	.	ID=Dca3605.1.exon3;Parent=Dca3605.1
scaffold113	Augustus	exon	21375	21545	.	+	.	ID=Dca3605.1.exon4;Parent=Dca3605.1
scaffold113	Augustus	exon	21982	22179	.	+	.	ID=Dca3605.1.exon5;Parent=Dca3605.1