Carnation DB

Dca3622.1

Annotation

5-exons
f-1
sp|B9H7V1_POPTR#SET domain protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=SDG927#GO:0005634;GO:0018024#1F0P1C
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3622.1	24	279	293	58.36	256	55	3e-90
Target_name	Start	End	Length	Cov(%)
sp\|B9H7V1_POPTR	165	480	495	63.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3622.1	24	290	293	55.29	267	51	2e-79
Target_name	Start	End	Length	Cov(%)
AT1G76710.1	171	489	492	64.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	139065	141746	.	-	.	ID=Dca3622.1;Parent=Dca3622
scaffold113	Augustus	exon	139065	139334	.	-	.	ID=Dca3622.1.exon1;Parent=Dca3622.1
scaffold113	Augustus	exon	139566	139875	.	-	.	ID=Dca3622.1.exon2;Parent=Dca3622.1
scaffold113	Augustus	exon	140343	140377	.	-	.	ID=Dca3622.1.exon3;Parent=Dca3622.1
scaffold113	Augustus	exon	140683	140881	.	-	.	ID=Dca3622.1.exon4;Parent=Dca3622.1
scaffold113	Augustus	exon	141679	141746	.	-	.	ID=Dca3622.1.exon5;Parent=Dca3622.1