Carnation DB

Dca3641.1

Annotation

7-exons
f-1
sp|A5ARV9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010143#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3641.1	7	1373	1479	39.35	1367	40	0
Target_name	Start	End	Length	Cov(%)
sp\|A5ARV9_VITVI	36	1470	1523	94.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3641.1	304	1371	1479	23.25	1068	32	4e-165
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	379	1389	1401	72.16

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	365329	371887	.	+	.	ID=Dca3641.1;Parent=Dca3641
scaffold113	Augustus	exon	365329	365456	.	+	.	ID=Dca3641.1.exon1;Parent=Dca3641.1
scaffold113	Augustus	exon	365592	365887	.	+	.	ID=Dca3641.1.exon2;Parent=Dca3641.1
scaffold113	Augustus	exon	365958	369652	.	+	.	ID=Dca3641.1.exon3;Parent=Dca3641.1
scaffold113	Augustus	exon	370114	370188	.	+	.	ID=Dca3641.1.exon4;Parent=Dca3641.1
scaffold113	Augustus	exon	370847	370933	.	+	.	ID=Dca3641.1.exon5;Parent=Dca3641.1
scaffold113	Augustus	exon	371482	371552	.	+	.	ID=Dca3641.1.exon6;Parent=Dca3641.1
scaffold113	Augustus	exon	371800	371887	.	+	.	ID=Dca3641.1.exon7;Parent=Dca3641.1