Dca36509.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold384)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36509.1 |
18 |
320 |
321 |
36.76 |
303 |
32 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
378 |
1501 |
24.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36509.1 |
39 |
175 |
321 |
13.08 |
137 |
31 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
216 |
296 |
46.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold384 |
Augustus |
mRNA |
88870 |
89922 |
. |
- |
. |
ID=Dca36509.1;Parent=Dca36509 |
| scaffold384 |
Augustus |
exon |
88870 |
89306 |
. |
- |
. |
ID=Dca36509.1.exon1;Parent=Dca36509.1 |
| scaffold384 |
Augustus |
exon |
89394 |
89922 |
. |
- |
. |
ID=Dca36509.1.exon2;Parent=Dca36509.1 |
