Dca36517.1
Annotation
- 2-exons
- f-1
- sp|Q9FX79_ARATH#Putative retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=F19K19.5#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold384)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36517.1 |
70 |
183 |
194 |
36.59 |
114 |
60 |
8e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FX79_ARATH |
963 |
1081 |
1413 |
8.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36517.1 |
70 |
182 |
194 |
32.98 |
113 |
54 |
9e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
134 |
251 |
1262 |
9.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold384 |
Augustus |
mRNA |
140218 |
141104 |
. |
+ |
. |
ID=Dca36517.1;Parent=Dca36517 |
| scaffold384 |
Augustus |
exon |
140218 |
140427 |
. |
+ |
. |
ID=Dca36517.1.exon1;Parent=Dca36517.1 |
| scaffold384 |
Augustus |
exon |
140730 |
141104 |
. |
+ |
. |
ID=Dca36517.1.exon2;Parent=Dca36517.1 |
