Dca36523.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3840)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36523.1 |
1 |
109 |
254 |
30.31 |
109 |
71 |
3e-40
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
598 |
706 |
896 |
12.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36523.1 |
179 |
254 |
254 |
12.99 |
76 |
44 |
8e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G01410.1 |
193 |
268 |
294 |
25.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3840 |
Augustus |
mRNA |
23700 |
27505 |
. |
- |
. |
ID=Dca36523.1;Parent=Dca36523 |
| scaffold3840 |
Augustus |
exon |
23700 |
24136 |
. |
- |
. |
ID=Dca36523.1.exon1;Parent=Dca36523.1 |
| scaffold3840 |
Augustus |
exon |
27178 |
27505 |
. |
- |
. |
ID=Dca36523.1.exon2;Parent=Dca36523.1 |
