Carnation DB

Dca36540.1

Annotation

5-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os11t0672600-01 Reverse transcriptase domain containing protein.
Repeat List (scaffold3844)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36540.1	2	229	296	27.7	228	32	3e-25
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	773	1036	1114	23.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36540.1	6	108	296	13.51	103	39	5e-17
Target_name	Start	End	Length	Cov(%)
AT3G24255.1	45	147	746	13.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3844	Augustus	mRNA	16612	19570	.	-	.	ID=Dca36540.1;Parent=Dca36540
scaffold3844	Augustus	exon	16612	16812	.	-	.	ID=Dca36540.1.exon1;Parent=Dca36540.1
scaffold3844	Augustus	exon	18403	18567	.	-	.	ID=Dca36540.1.exon2;Parent=Dca36540.1
scaffold3844	Augustus	exon	18706	18773	.	-	.	ID=Dca36540.1.exon3;Parent=Dca36540.1
scaffold3844	Augustus	exon	18969	19069	.	-	.	ID=Dca36540.1.exon4;Parent=Dca36540.1
scaffold3844	Augustus	exon	19215	19570	.	-	.	ID=Dca36540.1.exon5;Parent=Dca36540.1