Carnation DB

Dca36557.1

Annotation

7-exons
f-94
sp|B9GEX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1067428#GO:0005198#1F0P0C
Repeat List (scaffold3849)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36557.1	83	275	277	55.23	193	80	7e-84
Target_name	Start	End	Length	Cov(%)
sp\|B9GEX8_POPTR	55	246	247	77.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36557.1	32	275	277	51.26	244	58	7e-74
Target_name	Start	End	Length	Cov(%)
AT3G26070.1	1	241	242	99.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3849	Augustus	mRNA	21323	26014	.	+	.	ID=Dca36557.1;Parent=Dca36557
scaffold3849	Augustus	exon	21323	21585	.	+	.	ID=Dca36557.1.exon1;Parent=Dca36557.1
scaffold3849	Augustus	exon	22177	22318	.	+	.	ID=Dca36557.1.exon2;Parent=Dca36557.1
scaffold3849	Augus-PASA	exon	23436	23549	.	+	.	ID=Dca36557.1.exon3;Parent=Dca36557.1
scaffold3849	Augus-PASA	exon	24175	24270	.	+	.	ID=Dca36557.1.exon4;Parent=Dca36557.1
scaffold3849	Augus-PASA	exon	24773	24847	.	+	.	ID=Dca36557.1.exon5;Parent=Dca36557.1
scaffold3849	Augus-PASA	exon	25264	25331	.	+	.	ID=Dca36557.1.exon6;Parent=Dca36557.1
scaffold3849	Augus-PASA	exon	25939	26014	.	+	.	ID=Dca36557.1.exon7;Parent=Dca36557.1