Carnation DB

Dca36562.1

Annotation

9-exons
f-1
sp|F6GXZ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g00880#GO:0005622;GO:0006886#0F1P1C
sp|G7KW31_MEDTR#Class E vacuolar protein-sorting machinery protein HSE1#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_7g072310#GO:0005622;GO:0006886#0F1P1C
Repeat List (scaffold385)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36562.1	16	605	605	48.92	590	44	2e-122
Target_name	Start	End	Length	Cov(%)
sp\|F6GXZ1_VITVI	15	625	625	97.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36562.1	11	501	605	36.69	491	38	5e-86
Target_name	Start	End	Length	Cov(%)
Os05t0475300-01	10	556	626	87.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold385	Augustus	mRNA	50223	57736	.	-	.	ID=Dca36562.1;Parent=Dca36562
scaffold385	Augustus	exon	50223	50885	.	-	.	ID=Dca36562.1.exon1;Parent=Dca36562.1
scaffold385	Augustus	exon	51017	51257	.	-	.	ID=Dca36562.1.exon2;Parent=Dca36562.1
scaffold385	Augustus	exon	51643	51918	.	-	.	ID=Dca36562.1.exon3;Parent=Dca36562.1
scaffold385	Augustus	exon	52024	52109	.	-	.	ID=Dca36562.1.exon4;Parent=Dca36562.1
scaffold385	Augustus	exon	52504	52585	.	-	.	ID=Dca36562.1.exon5;Parent=Dca36562.1
scaffold385	Augustus	exon	52722	52882	.	-	.	ID=Dca36562.1.exon6;Parent=Dca36562.1
scaffold385	Augustus	exon	54066	54179	.	-	.	ID=Dca36562.1.exon7;Parent=Dca36562.1
scaffold385	Augustus	exon	54699	54750	.	-	.	ID=Dca36562.1.exon8;Parent=Dca36562.1
scaffold385	Augustus	exon	57594	57736	.	-	.	ID=Dca36562.1.exon9;Parent=Dca36562.1