Carnation DB

Dca36566.1

Annotation

23-exons
f-1
sp|B9HD91_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_560967#GO:0005618;GO:0005737;GO:0005524;GO:0008716;GO:0046872;GO:0009252#3F1P2C
Os07t0691200-02 Similar to D-alanine--D-alanine ligase family.
Repeat List (scaffold385)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36566.1	50	918	924	65.15	869	67	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HD91_POPTR	52	929	931	94.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36566.1	70	918	924	59.41	849	63	0
Target_name	Start	End	Length	Cov(%)
AT3G08840.2	73	935	937	92.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold385	Augustus	mRNA	103013	115821	.	+	.	ID=Dca36566.1;Parent=Dca36566
scaffold385	Augustus	exon	103013	103321	.	+	.	ID=Dca36566.1.exon1;Parent=Dca36566.1
scaffold385	Augustus	exon	103529	103600	.	+	.	ID=Dca36566.1.exon2;Parent=Dca36566.1
scaffold385	Augustus	exon	104448	104491	.	+	.	ID=Dca36566.1.exon3;Parent=Dca36566.1
scaffold385	Augustus	exon	104579	104690	.	+	.	ID=Dca36566.1.exon4;Parent=Dca36566.1
scaffold385	Augustus	exon	105189	105251	.	+	.	ID=Dca36566.1.exon5;Parent=Dca36566.1
scaffold385	Augustus	exon	105564	105641	.	+	.	ID=Dca36566.1.exon6;Parent=Dca36566.1
scaffold385	Augustus	exon	105739	105831	.	+	.	ID=Dca36566.1.exon7;Parent=Dca36566.1
scaffold385	Augustus	exon	106170	106289	.	+	.	ID=Dca36566.1.exon8;Parent=Dca36566.1
scaffold385	Augustus	exon	106838	106924	.	+	.	ID=Dca36566.1.exon9;Parent=Dca36566.1
scaffold385	Augustus	exon	107225	107428	.	+	.	ID=Dca36566.1.exon10;Parent=Dca36566.1
scaffold385	Augustus	exon	107517	107564	.	+	.	ID=Dca36566.1.exon11;Parent=Dca36566.1
scaffold385	Augustus	exon	107663	107917	.	+	.	ID=Dca36566.1.exon12;Parent=Dca36566.1
scaffold385	Augustus	exon	109425	109519	.	+	.	ID=Dca36566.1.exon13;Parent=Dca36566.1
scaffold385	Augustus	exon	110569	110813	.	+	.	ID=Dca36566.1.exon14;Parent=Dca36566.1
scaffold385	Augustus	exon	111286	111354	.	+	.	ID=Dca36566.1.exon15;Parent=Dca36566.1
scaffold385	Augustus	exon	111452	111516	.	+	.	ID=Dca36566.1.exon16;Parent=Dca36566.1
scaffold385	Augustus	exon	111981	112165	.	+	.	ID=Dca36566.1.exon17;Parent=Dca36566.1
scaffold385	Augustus	exon	112256	112334	.	+	.	ID=Dca36566.1.exon18;Parent=Dca36566.1
scaffold385	Augustus	exon	113063	113303	.	+	.	ID=Dca36566.1.exon19;Parent=Dca36566.1
scaffold385	Augustus	exon	113624	113669	.	+	.	ID=Dca36566.1.exon20;Parent=Dca36566.1
scaffold385	Augustus	exon	114357	114465	.	+	.	ID=Dca36566.1.exon21;Parent=Dca36566.1
scaffold385	Augustus	exon	115125	115187	.	+	.	ID=Dca36566.1.exon22;Parent=Dca36566.1
scaffold385	Augustus	exon	115729	115821	.	+	.	ID=Dca36566.1.exon23;Parent=Dca36566.1